PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG060640.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 745aa    MW: 77747.4 Da    PI: 9.9396
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG060640.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.14e-08135179244
                       SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS
   Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 
                       ++WT++Ed  l  +v++ G g+W  I r+ +   +Rt  q+  rw
  TRIDC6BG060640.4 135 KAWTKDEDAELMAGVHKCGEGNWLDILRKYNfdSTRTYGQLSQRW 179
                       68*******************************99**99999999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 745 aa     Download sequence    
MLWRYIAYGH DFVENVEDGS PQPLGDESDL ECEIEPSPKP SNEAAAEASR FAKILMYGPS  60
REQGSSHRAN SDVPLLNTPN EKIPRVSSDK QLAQSHRLTN GTGPVSNSKQ APHTGLSPDS  120
FDGNGPHNKK TKKTKAWTKD EDAELMAGVH KCGEGNWLDI LRKYNFDSTR TYGQLSQRWA  180
VISKRQATTK PAKAKPVTGG YDMKATQKAF FMALDMPMGK PGGLSTLRSG ASQQSTQHSA  240
PVFGAAAPEL KSATSSSFSL PVPVPSAAPG VVSAQVQVQP PRVQQAPPQA APSKVSIASI  300
KSRNSSKKQT AQANPTNAPS SIQAAAIAAG GRIATASIAT NLLKAAQSPQ AVHIRSRGKG  360
SSKTSTSSKA STMAGEPGTQ TGSAQHPELL NCSAPTPSPT VLITQSTEQV NVVPEVAGVN  420
PPEQSASAHL LEPDRTLSTT PVPGPCDNME IDDDSTFCVV TMEDLFPEDV KQPETVSQPE  480
MVRQPETVRP PETVSQPEMV RQSETVRQPE MVKQPEMVDP KAEEMIDPKD ADMLEFDRFV  540
AQGCLTTDYS DKSKGVKIAP GAQGATASQK KKQLPTVGKS IPVFRAPVIM KKTKALASHG  600
ATLASTVTSS GLVGTGNAGV LSKAIYRKPA GPGTTGKQNR CQEIMAQKQH AINSNSSAMA  660
RNAAPGTGTP ARNVAAGVGA PARNAAPATG TPAKSAAPAT GPSAKNAAPA SGTPARNTAP  720
ATGTPPVRNM APGTGTPPVR NTAPG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.14e-22MYB_related family protein