PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG060640.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 796aa MW: 83544 Da PI: 9.9147

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG060640.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25	4.3e-08	186	230	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 ++WT++Ed l +v++ G g+W I r+ + +Rt q+ rw TRIDC6BG060640.3 186 KAWTKDEDAELMAGVHKCGEGNWLDILRKYNfdSTRTYGQLSQRW 230 68*****************************9999999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 796 aa Download sequence
DDLYLILHKY SPATILTALQ EVTQHAQRRS IDWRALVAKT ATGITSAREY QMLWRYIAYG 60 HDFVENVEDG SPQPLGDESD LECEIEPSPK PSNEAAAEAS RFAKILMYGP SREQGSSHRA 120 NSDVPLLNTP NEKIPRVSSD KQLAQSHRLT NGTGPVSNSK QAPHTGLSPD SFDGNGPHNK 180 KTKKTKAWTK DEDAELMAGV HKCGEGNWLD ILRKYNFDST RTYGQLSQRW AVISKRQATT 240 KPAKAKPVTG GYDMKATQKA FFMALDMPMG KPGGLSTLRS GASQQSTQHS APVFGAAAPE 300 LKSATSSSFS LPVPVPSAAP GVVSAQVQVQ PPRVQQAPPQ AAPSKVSIAS IKSRNSSKKQ 360 TAQANPTNAP SSIQAAAIAA GGRIATASIA TNLLKAAQSP QAVHIRSRGK GSSKTSTSSK 420 ASTMAGEPGT QTGSAQHPEL LNCSAPTPSP TVLITQSTEQ VNVVPEVAGV NPPEQSASAH 480 LLEPDRTLST TPVPGPCDNM EIDDDSTFCV VTMEDLFPED VKQPETVSQP EMVRQPETVR 540 PPETVSQPEM VRQSETVRQP EMVKQPEMVD PKAEEMIDPK DADMLEFDRF VAQGCLTTDY 600 SDKSKGVKIA PGAQGATASQ KKKQLPTVGK SIPVFRAPVI MKKTKALASH GATLASTVTS 660 SGLVGTGNAG VLSKAIYRKP AGPGTTGKQN RCQEIMAQKQ HAINSNSSAM ARNAAPGTGT 720 PARNVAAGVG APARNAAPAT GTPAKSAAPA TGPSAKNAAP ASGTPARNTA PATGTPPVRN 780 MAPGTGTPPV RNTAPG

Sequence ? help Back to Top

Protein Sequence Length: 796 aa Download sequence

DDLYLILHKY SPATILTALQ EVTQHAQRRS IDWRALVAKT ATGITSAREY QMLWRYIAYG  60
HDFVENVEDG SPQPLGDESD LECEIEPSPK PSNEAAAEAS RFAKILMYGP SREQGSSHRA  120
NSDVPLLNTP NEKIPRVSSD KQLAQSHRLT NGTGPVSNSK QAPHTGLSPD SFDGNGPHNK  180
KTKKTKAWTK DEDAELMAGV HKCGEGNWLD ILRKYNFDST RTYGQLSQRW AVISKRQATT  240
KPAKAKPVTG GYDMKATQKA FFMALDMPMG KPGGLSTLRS GASQQSTQHS APVFGAAAPE  300
LKSATSSSFS LPVPVPSAAP GVVSAQVQVQ PPRVQQAPPQ AAPSKVSIAS IKSRNSSKKQ  360
TAQANPTNAP SSIQAAAIAA GGRIATASIA TNLLKAAQSP QAVHIRSRGK GSSKTSTSSK  420
ASTMAGEPGT QTGSAQHPEL LNCSAPTPSP TVLITQSTEQ VNVVPEVAGV NPPEQSASAH  480
LLEPDRTLST TPVPGPCDNM EIDDDSTFCV VTMEDLFPED VKQPETVSQP EMVRQPETVR  540
PPETVSQPEM VRQSETVRQP EMVKQPEMVD PKAEEMIDPK DADMLEFDRF VAQGCLTTDY  600
SDKSKGVKIA PGAQGATASQ KKKQLPTVGK SIPVFRAPVI MKKTKALASH GATLASTVTS  660
SGLVGTGNAG VLSKAIYRKP AGPGTTGKQN RCQEIMAQKQ HAINSNSSAM ARNAAPGTGT  720
PARNVAAGVG APARNAAPAT GTPAKSAAPA TGPSAKNAAP ASGTPARNTA PATGTPPVRN  780
MAPGTGTPPV RNTAPG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	1e-37	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG060640.3