PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG060640.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 889aa MW: 92580.2 Da PI: 10.1691

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG060640.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.8	4.9e-08	205	249	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 ++WT++Ed l +v++ G g+W I r+ + +Rt q+ rw TRIDC6BG060640.2 205 KAWTKDEDAELMAGVHKCGEGNWLDILRKYNfdSTRTYGQLSQRW 249 68*****************************9999999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 889 aa Download sequence
MASAAAAALA AAGKRELSED DLYLILHKYS PATILTALQE VTQHAQRRSI DWRALVAKTA 60 TGITSAREYQ MLWRYIAYGH DFVENVEDGS PQPLGDESDL ECEIEPSPKP SNEAAAEASR 120 FAKILMYGPS REQGSSHRAN SDVPLLNTPN EKIPRVSSDK QLAQSHRLTN GTGPVSNSKQ 180 APHTGLSPDS FDGNGPHNKK TKKTKAWTKD EDAELMAGVH KCGEGNWLDI LRKYNFDSTR 240 TYGQLSQRWA VISKRQATTK PAKAKPVTGG YDMKATQKAF FMALDMPMGK PGGLSTLRSG 300 ASQQSTQHSA PVFGAAAPEL KSATSSSFSL PVPVPSAAPG VVSAQVQVQP PRVQQAPPQA 360 APSKVSIASI KSRNSSKKQT AQANPTNAPS SIQAAAIAAG GRIATASIAT NLLKAAQSPQ 420 AVHIRSRGKG SSKTSTSSKA STMAGEPGTQ TGSAQHPELL NCSAPTPSPT VLITQSTEQV 480 NVVPEVAGVN PPEQSASAHL LEPDRTLSTT PVPGPCDNME IDDDSTFCVV TMEDLFPEDV 540 KQPETVSQPE MVRQPETVRP PETVSQPEMV RQSETVRQPE MVKQPEMVDP KAEEMIDPKD 600 ADMLEFDRFV AQGCLTTDYS DKSKGVKIAP GAQGATASQK KKQLPTVGKS IPVFRAPVIM 660 KKTKALASHG ATLASTVTSS GLVGTGNAGV LSKAIYRKPA GPGTTGKQNR CQEIMAQKQH 720 AINSNSSAMA RNAAPGTGTP ARNVAAGVGA PARNAAPATG TPAKSAAPAT GPSAKNAAPA 780 SGTPARNTAP ATGTPPVRNM APGTGTPPVR NTAPGTGTPP ARNSLTGTVT PPARNLLTGT 840 GTPPARNAAP VTGAPPARNL LTVTGTPPAI RQHNPAVNGA SKGNLPASQ

Sequence ? help Back to Top

Protein Sequence Length: 889 aa Download sequence

MASAAAAALA AAGKRELSED DLYLILHKYS PATILTALQE VTQHAQRRSI DWRALVAKTA  60
TGITSAREYQ MLWRYIAYGH DFVENVEDGS PQPLGDESDL ECEIEPSPKP SNEAAAEASR  120
FAKILMYGPS REQGSSHRAN SDVPLLNTPN EKIPRVSSDK QLAQSHRLTN GTGPVSNSKQ  180
APHTGLSPDS FDGNGPHNKK TKKTKAWTKD EDAELMAGVH KCGEGNWLDI LRKYNFDSTR  240
TYGQLSQRWA VISKRQATTK PAKAKPVTGG YDMKATQKAF FMALDMPMGK PGGLSTLRSG  300
ASQQSTQHSA PVFGAAAPEL KSATSSSFSL PVPVPSAAPG VVSAQVQVQP PRVQQAPPQA  360
APSKVSIASI KSRNSSKKQT AQANPTNAPS SIQAAAIAAG GRIATASIAT NLLKAAQSPQ  420
AVHIRSRGKG SSKTSTSSKA STMAGEPGTQ TGSAQHPELL NCSAPTPSPT VLITQSTEQV  480
NVVPEVAGVN PPEQSASAHL LEPDRTLSTT PVPGPCDNME IDDDSTFCVV TMEDLFPEDV  540
KQPETVSQPE MVRQPETVRP PETVSQPEMV RQSETVRQPE MVKQPEMVDP KAEEMIDPKD  600
ADMLEFDRFV AQGCLTTDYS DKSKGVKIAP GAQGATASQK KKQLPTVGKS IPVFRAPVIM  660
KKTKALASHG ATLASTVTSS GLVGTGNAGV LSKAIYRKPA GPGTTGKQNR CQEIMAQKQH  720
AINSNSSAMA RNAAPGTGTP ARNVAAGVGA PARNAAPATG TPAKSAAPAT GPSAKNAAPA  780
SGTPARNTAP ATGTPPVRNM APGTGTPPVR NTAPGTGTPP ARNSLTGTVT PPARNLLTGT  840
GTPPARNAAP VTGAPPARNL LTVTGTPPAI RQHNPAVNGA SKGNLPASQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	7e-40	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG060640.2