PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG060280.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 224aa MW: 24531.9 Da PI: 9.8563 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.4 | 3.6e-18 | 22 | 70 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 ++G+r+++ +g+W+AeIrdps+ r++lg+f +aeeAa+a++ +++++g TRIDC6BG060280.2 22 FRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTFNSAEEAARAYDVEARRIRG 70 8*******.**********965...4************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
MTTAGFDGPA QRSAKRKRKN EFRGIRQRPW GKWAAEIRDP SKGVRVWLGT FNSAEEAARA 60 YDVEARRIRG KKAKVNFPEE PTVPQKRRAC PAAPKVPKSS AAQEPTVIPA VNNLANPNAF 120 VYPSADFASK QPLVQPDNVP FVPAINSAAP VEAPVMNMYS DQGSNSFGCS DLGWEYDTKT 180 PDISSIAPIS TIAEGAETAL LQSNTYNPWC LLSWRTMLLI LNLG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47520.1 | 7e-35 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG060280.2 |