PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG060280.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 398aa    MW: 42985.1 Da    PI: 4.4803
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG060280.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.18.9e-18133181355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       ++G+r+++ +g+W+AeIrdps+     r++lg+f +aeeAa+a++  +++++g
  TRIDC6BG060280.1 133 FRGIRQRP-WGKWAAEIRDPSK---GVRVWLGTFNSAEEAARAYDVEARRIRG 181
                       8*******.**********965...4************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 398 aa     Download sequence    
MCGGAILKGL KVPAPARKVT AAVLWPEKNK PKRADGGARH LAGLGRRGGL GLDDGEADFE  60
ADFEEFEADS GDSDQELGRG GVAEKDGDDE VVETKPFAAV KRSLSQDDLS TMTTAGFDGP  120
AQRSAKRKRK NEFRGIRQRP WGKWAAEIRD PSKGVRVWLG TFNSAEEAAR AYDVEARRIR  180
GKKAKVNFPE EPTVPQKRRA CPAAPKVPKS SAAQEPTVIP AVNNLANPNA FVYPSADFAS  240
KQPLVQPDNV PFVPAINSAA PVEAPVMNMY SDQGSNSFGC SDLGWEYDTK TPDISSIAPI  300
STIAEGAETA LLQSNTYNPA VIAEGAESAP VQTNTYNSVV PPVMENNAVD FEPWMRFLLD  360
DGVDEPIDSL LNFDVPQDVV GNMDLWSFDD MPICGEIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.12e-33ERF family protein