PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG058680.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 242aa    MW: 26386.5 Da    PI: 10.5737
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG058680.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA104.96.9e-3385141158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       dep++VN+KQy++Il+RRq Rakle+++kl +k+rkpylheSRh hA++R+RgsgGrF
  TRIDC6BG058680.1  85 DEPIFVNPKQYNGILRRRQLRAKLEAQNKL-TKNRKPYLHESRHLHAMKRARGSGGRF 141
                       79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
KGDSFGKSVD DHMRSTLTFG DKHSLYASQN TDYGHPMACI SYPFNDSGSG VWAAYGSRAM  60
FQPLMPGGGA SATARVPLPV ELAADEPIFV NPKQYNGILR RRQLRAKLEA QNKLTKNRKP  120
YLHESRHLHA MKRARGSGGR FLNSKQLKQQ QQQSGSACTK VIADGANSLG STHLRLGSGA  180
AGDRTNSASK AMSSQENSKR VAAPAPAFTM IQAARKDDDF FHHHAHHLSF SGHFGQSSDR  240
YT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.12e-36NF-YA family protein