PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG054970.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 157aa MW: 18021.4 Da PI: 8.4983 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 87.4 | 8.2e-28 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krie+ rqvtfskRr g++KKAeELSvLCda+va+i+fsstgkl ++s TRIDC6BG054970.8 9 KRIESAAARQVTFSKRRRGLFKKAEELSVLCDADVALIVFSSTGKLSQFAS 59 79*********************************************9986 PP | |||||||
2 | K-box | 47.7 | 6.7e-17 | 90 | 156 | 18 | 84 |
K-box 18 qqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 + ++a+L++++ + +R++ Ge+Le Ls+ eLqqLe++Le++l ++ ++K++ +leqi+el +k+ TRIDC6BG054970.8 90 HSKYANLNDQLAEASLRLRQMRGEELEGLSVDELQQLEKNLETGLHRVLQTKDQQFLEQINELHRKN 156 345666666666666899*********************************************9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MARERREIKR IESAAARQVT FSKRRRGLFK KAEELSVLCD ADVALIVFSS TGKLSQFASS 60 SMNEIIDKYS THSKNLGKTD QPALDLNLEH SKYANLNDQL AEASLRLRQM RGEELEGLSV 120 DELQQLEKNL ETGLHRVLQT KDQQFLEQIN ELHRKNH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 8e-67 | MIKC_MADS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG054970.8 |