PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG052420.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 191aa    MW: 21593.1 Da    PI: 12.4845
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG052420.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.21.4e-16249148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd++lv     +G  +W+++++  g+ R++k+c++rw +yl
  TRIDC6BG052420.3  2 KGPWTAEEDQKLVAFLLSHGHCCWRLVPKLAGLLRCGKSCRLRWTNYL 49
                      79******************************99************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
KKGPWTAEED QKLVAFLLSH GHCCWRLVPK LAGLLRCGKS CRLRWTNYLR PDLKRGLLSD  60
DEEKLVIDLH SQLGNRYGPR SRRGCRAGRT TRSRTTGTPT SGRSSRRWAS TPSRTSPSPP  120
PAPTPSRTRS RTPTATAKPR RHLLCLHRVG RVAVPLLLLV RLGLGLRRDA RRRRRGLAGP  180
PRPLPGRRHH R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.12e-43MYB family protein