PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG052420.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 263aa    MW: 28225.7 Da    PI: 5.6089
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG052420.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.42.5e-161461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+eEd++lv     +G  +W+++++  g+ R++k+c++rw +yl
  TRIDC6BG052420.2 14 KGPWTAEEDQKLVAFLLSHGHCCWRLVPKLAGLLRCGKSCRLRWTNYL 61
                      79******************************99************97 PP
2Myb_DNA-binding543.8e-1770111447
                       S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                        + +E++l +d++ qlG++ W++Ia++++ gRt++++k++w+++
  TRIDC6BG052420.2  70 LSDDEEKLVIDLHSQLGNR-WSKIAARLP-GRTDNEIKNHWNTH 111
                       589****************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MGRQPCCEKV GLKKGPWTAE EDQKLVAFLL SHGHCCWRLV PKLAGLLRCG KSCRLRWTNY  60
LRPDLKRGLL SDDEEKLVID LHSQLGNRWS KIAARLPGRT DNEIKNHWNT HIRKKLKKMG  120
LDPVTHQPVA ASRADPLQDP QQDPHCDGKA SSQESAGYGT GASAEEEALT SAEPKQGATC  180
SASTASAVSP SPCSSSSASA SASAATPGGA DVDWPDPLDL FQVDAIIDMD WASILSGSGG  240
GGDIGVDLFD QCSDVGFDQE VWM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66230.13e-82MYB family protein