PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6BG052030.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HD-ZIP

Protein Properties

Length: 349aa MW: 38191.7 Da PI: 4.3251

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6BG052030.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	64.4	1.6e-20	82	135	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe+++++ e+++eLA+klgL+ rqV vWFqNrRa++k TRIDC6BG052030.3 82 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWK 135 5678*************************************************9 PP
2	HD-ZIP_I/II	129.2	1.7e-41	81	172	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqv+lLE+sFeee+kLeperK+elar+LglqprqvavWFqnrRAR+ktk lE+d+++Lk+++dal++++++L +++++L +++ TRIDC6BG052030.3 81 EKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKTLERDFDRLKASFDALRADHDALLQDNHRLLSQVV 172 69*************************************************************************************99986 PP

Sequence ? help Back to Top
Protein Sequence Length: 349 aa Download sequence
WSPAGSSSTR RAPATDRCSS WTVARAASPA RPACSIEPCL SDEGVRPVLG GMEEGRGVKR 60 PFFTSPDDML EEEYYDEQLP EKKRRLTPEQ VHLLERSFEE ENKLEPERKT ELARKLGLQP 120 RQVAVWFQNR RARWKTKTLE RDFDRLKASF DALRADHDAL LQDNHRLLSQ VVTLTEKMQD 180 KEAPEGSFGA AVDASEPEQA AAEAEAKTSL ADAEEQAAAA EAFEVVQQQQ QLHVKDEERL 240 SPGSGGSAVL DARDALLGSG CGLAGVVDSS VDSYCFPGGA GGDEYHECVM GPVAGGIQSE 300 EDDGAGSDEG CSYYPDDAAV FFAAAQGHSH HHTDDDDQDD GQISYWMWN

Sequence ? help Back to Top

Protein Sequence Length: 349 aa Download sequence

WSPAGSSSTR RAPATDRCSS WTVARAASPA RPACSIEPCL SDEGVRPVLG GMEEGRGVKR  60
PFFTSPDDML EEEYYDEQLP EKKRRLTPEQ VHLLERSFEE ENKLEPERKT ELARKLGLQP  120
RQVAVWFQNR RARWKTKTLE RDFDRLKASF DALRADHDAL LQDNHRLLSQ VVTLTEKMQD  180
KEAPEGSFGA AVDASEPEQA AAEAEAKTSL ADAEEQAAAA EAFEVVQQQQ QLHVKDEERL  240
SPGSGGSAVL DARDALLGSG CGLAGVVDSS VDSYCFPGGA GGDEYHECVM GPVAGGIQSE  300
EDDGAGSDEG CSYYPDDAAV FFAAAQGHSH HHTDDDDQDD GQISYWMWN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	8e-56	HD-ZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC6BG052030.3