PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG047020.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 207aa MW: 22306.7 Da PI: 10.6984 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55 | 1.9e-17 | 41 | 85 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT+eE++++++a +++G W++I +++g ++t+ q++s+ qk+ TRIDC6BG047020.3 41 REKWTEEEHKRFLEALQLHGRA-WRRIQEHIG-TKTAVQIRSHAQKF 85 789*****************88.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MATDESTADH RRSRPSSHDM DLSGDDHVPK ARKPYTITKQ REKWTEEEHK RFLEALQLHG 60 RAWRRIQEHI GTKTAVQIRS HAQKFFSKVT RESSGSSSGS GAAAATATAA IQIPPPRPKR 120 KPTHPYPRKA DDGAAAGGKH APGLTHLERP PVRMGEQEEG SPTSVLTASR VEASGGRFSN 180 NSSGSRSPVP SAAGSLYGSS VDRGDAI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17300.1 | 1e-38 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG047020.3 |