PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG043890.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Trihelix
Protein Properties Length: 543aa    MW: 58451.9 Da    PI: 6.7488
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG043890.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix94.11.3e-2991175187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW+++e+ aLi++r+em+ ++r+++lk+p Weevs+k++e g++rs+k+Ckek+en+ k+y+++keg+ +r  ++ +++++f +lea
  TRIDC6BG043890.2  91 RWPREETVALIRIRSEMDAAFRNAALKAPIWEEVSRKLAELGYRRSAKKCKEKFENVDKYYRRTKEGRAGR--QDGKNYRFFAELEA 175
                       8********************************************************************97..66678******985 PP
2trihelix106.51.8e-33371456187
          trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                       rW+k+ev+aLi++r e++e+ ++  +k+plWe++s+ mr+ g++rs+k+Ckekwen+nk++kk+ke++k+r +e+s+tcpyf+ql+a
  TRIDC6BG043890.2 371 RWPKEEVHALIQLRMEKDEHCQDMGAKGPLWEDISAGMRRIGYNRSSKRCKEKWENINKYFKKVKESNKRR-PEDSKTCPYFHQLDA 456
                       8********************************************************************97.99***********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
AGYPYGPPLT GMTPLLPQPA SAAVSVSSIP SPSPPPMQPQ PAGTNLDQLP AAGPGSGSGA  60
VNFHHDDDNM LVDAGSGRSG GDAGAGGSGS RWPREETVAL IRIRSEMDAA FRNAALKAPI  120
WEEVSRKLAE LGYRRSAKKC KEKFENVDKY YRRTKEGRAG RQDGKNYRFF AELEALHAAA  180
PQQNLPMATA ATILPDPRPL AMAPAYPGAG LPDLSLSSNS ESESDDESDE EEDQAGGGGG  240
RSNEGMMALF EGMIKQITEK QDATQRLFLE TLEKWEADRT AREEAWRRQE LARISREREQ  300
HARERAAAAA RDAALIAFLQ RVGGNSVLPT PMPAHTAPHP DAPAASLQLV VAASEEGGRR  360
GGGESGAGMS RWPKEEVHAL IQLRMEKDEH CQDMGAKGPL WEDISAGMRR IGYNRSSKRC  420
KEKWENINKY FKKVKESNKR RPEDSKTCPY FHQLDAIYRK KQFAVNNAGG GCSSTASGNA  480
VGAVNASASE QHNPWRELEG KISNDFDRRH SVGGGSSDAP PGDGEVAAAS TVLDAIATNK  540
SNA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1357363GGRRGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.22e-51Trihelix family protein