PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG043350.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 160aa    MW: 17868.6 Da    PI: 10.043
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG043350.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.45.3e-1666111148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T+eE++ +v+++   G++ W+ Ia+ ++ gRt++++k++w+++l
  TRIDC6BG043350.5  66 RGPFTAEEQKSIVQLHGIVGNK-WSMIAAQLP-GRTDNEIKNYWNTHL 111
                       89********************.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 160 aa     Download sequence    
SGRVVVSSLI EQAFVGNTKI CTVFNSPRER VLMCELNWVA LPAELNRCGK SCRLRWTNYL  60
RPDIKRGPFT AEEQKSIVQL HGIVGNKWSM IAAQLPGRTD NEIKNYWNTH LKKQLRRMGL  120
DEPPPGPTAG CPAARHMAQW ETARLEAEAR LSLLSSSGAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61250.12e-46MYB family protein