PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC6BG043350.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 226aa MW: 24260.3 Da PI: 7.1296 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.5 | 9.7e-16 | 35 | 80 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+eE++ +v+++ G++ W+ Ia+ ++ gRt++++k++w+++l TRIDC6BG043350.4 35 RGPFTAEEQKSIVQLHGIVGNK-WSMIAAQLP-GRTDNEIKNYWNTHL 80 89********************.*********.************996 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 226 aa Download sequence |
PTMTLNWVAL PAELNRCGKS CRLRWTNYLR PDIKRGPFTA EEQKSIVQLH GIVGNKWSMI 60 AAQLPGRTDN EIKNYWNTHL KKQLRRMGLD EPPPGPTAGC PAARHMAQWE TARLEAEARL 120 SLLSSSGAAA TATTSGSASS SSTAAAGAAV AEHAKPADVF LRLWNSDIGS SFRKAAAPVS 180 VKEEEAVVPG DDSSAASNEM DAAAAEYQMF LDFAGEELGL FHGRHG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G61250.1 | 3e-46 | MYB family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC6BG043350.4 |