PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG043320.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 116aa    MW: 13063.9 Da    PI: 10.8084
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG043320.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.58.3e-105087136
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS- CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRt 36
                      +g W++eEd++l d++ ++G g+W++ +++ g   +R+
  TRIDC6BG043320.1 50 KGLWSPEEDQKLRDYILRHGHGCWSALPAKAGkaDHRS 87
                      678**************************999665555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
PSQPRLEPEA SATAAASCTP LRGFVPRRSS ACKQAMGCKA CDKPRPSYRK GLWSPEEDQK  60
LRDYILRHGH GCWSALPAKA GKADHRSRIR ISTSTKRGII EENSVRWVDD RVLRHR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G48920.17e-14MYB family protein