PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG041860.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 252aa    MW: 27488.6 Da    PI: 6.396
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG041860.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.64.4e-161461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT++Ed  lv  ++q+G  +W++ ++  g+ R++k+c++rw +y+
  TRIDC6BG041860.1 14 RGPWTADEDMTLVAHIEQHGHSNWRALPKQAGLLRCGKSCRLRWINYM 61
                      89******************************99************97 PP
2Myb_DNA-binding54.33.1e-1767112148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T eE++ +++++++lG++ W+tIa++++ gRt++++k+ w+++l
  TRIDC6BG041860.1  67 RGNFTSEEEDAIIQLHAMLGNR-WSTIAARLP-GRTDNEIKNVWHTHL 112
                       89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MVRAPCCEKM GLKRGPWTAD EDMTLVAHIE QHGHSNWRAL PKQAGLLRCG KSCRLRWINY  60
MRPDIKRGNF TSEEEDAIIQ LHAMLGNRWS TIAARLPGRT DNEIKNVWHT HLKKRLASSS  120
KTSGQAAPKH KAKKPPMAAS ALEGPTSEPA SSSPGQSFSM SPGQSLSTSS SADYSMASSL  180
ENTGSSSSEE FQIDDSFWSE TLAMSVDSFG SGMETSDTFG ADSASPSSSN DEMDFWVTLF  240
MQASDIQSLS QI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.14e-74MYB family protein