PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6BG033390.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 221aa MW: 23754.6 Da PI: 6.2687 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 59.1 | 1.1e-18 | 50 | 102 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + ++GVr++ + grWv+e+r+p e+g +r +lg++ tae Aa+a++aa++ l+g TRIDC6BG033390.1 50 PVFRGVRRRGSAGRWVCEVRVPGERG--TRLWLGTYITAEAAARAHDAAMLMLRG 102 579*******************6655..************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
IDQQPAAMDM SLEHSSSPSS SSTTERAGTA WPWPPKRPAG RTKFRETRHP VFRGVRRRGS 60 AGRWVCEVRV PGERGTRLWL GTYITAEAAA RAHDAAMLML RGRSAACLNF RDSAWLLAVP 120 PAFTNLSDVR RAAVQAVADF LRRPEATSAA AAVQEVTSSV SAPSSAVCSV PSSETAQASA 180 DAAFEAPAAL DMDVFDLDCL FGETDSDAYY YANLAQGLLM E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 6e-30 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6BG033390.1 |