PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC6BG027340.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 176aa MW: 19003.1 Da PI: 7.5821 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 52.6 | 1e-16 | 83 | 137 | 3 | 60 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 ++kr rr+ +NRe+ArrsR+RK+a + eLe+ v++L + N + ++l++ ++ + TRIDC6BG027340.6 83 DVKRMRRMVSNRESARRSRKRKQAHLVELETQVDQLRGDNA---SIFKQLTDANQQFT 137 579*************************************7...56677777776655 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 176 aa Download sequence |
GAFGFADSNH LWPQSPNLGA RHPAVSTTIE SQSSIYAAAS PTSATNLSIK ESQAFGGTSG 60 SDSDSESMFD DGGLCDNGTN PTDVKRMRRM VSNRESARRS RKRKQAHLVE LETQVDQLRG 120 DNASIFKQLT DANQQFTTAV TDNRILKSDV EALRVKVKLA EDMVARGAMS CGLGHL |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 98 | 104 | RRSRKRK |
2 | 98 | 105 | RRSRKRKQ |
3 | 100 | 105 | SRKRKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G24800.1 | 6e-43 | bZIP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC6BG027340.6 |