PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG022350.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 322aa    MW: 36198.3 Da    PI: 10.4117
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG022350.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.81.5e-1454113255
               AP2   2 gykGVrwdkkrgrWvAeIrd.pse....ngkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                        y+GV++++++gr++A+++d  ++    ++k+ ++++lg +g +e Aa+a++ a++k++g
  TRIDC6BG022350.2  54 AYRGVTRHRWTGRFEAHLWDkNTWtepqRKKKgRQVYLGAYGGEEAAARAYDLAALKYWG 113
                       69******************8777775333446*************************98 PP
2AP2491.6e-15156207155
               AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       s+y+GV +++ +g+W+A+I   +   g +k+ +lg++ t eeAa a++ a+ + +g
  TRIDC6BG022350.2 156 SKYRGVARHHHNGKWEARIGRvF---G-NKYLYLGTYVTQEEAAMAYDIAAIEHRG 207
                       89****99**********99966...3.6**********************99987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
SRLHHLETTL TPVMAKQRQS SAGAGNVASD AVRPKSERAR RSVTRRRPSQ RTSAYRGVTR  60
HRWTGRFEAH LWDKNTWTEP QRKKKGRQVY LGAYGGEEAA ARAYDLAALK YWGRGTVLNF  120
SLSSYDQELK EMEEQSREEY IGSLRRKSTG FSRGVSKYRG VARHHHNGKW EARIGRVFGN  180
KYLYLGTYVT QEEAAMAYDI AAIEHRGLNG VTNFDVSRYI KWHHCCHAND AGGLNTTLCV  240
NDRLQPSQAS PTSHAVSSLG PLLQSPRLKE MMERVAASQS QSNTNSPSSS SCPPSPPPTT  300
HQHEPRPRNS STRCSFPDDV QT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G79700.21e-81AP2 family protein