PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG017850.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 122aa    MW: 13759.8 Da    PI: 11.1736
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG017850.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.7e-18148455
               AP2  4 kGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +G+r+++ +g+W+AeIrdps+     r++lg+f +aeeAa+a++  ++ ++g
  TRIDC6BG017850.1  1 RGIRQRP-WGKWAAEIRDPSK---GSRVWLGTFNSAEEAARAYDVEARMIRG 48
                      8******.**********965...4*******************99998887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 122 aa     Download sequence    
RGIRQRPWGK WAAEIRDPSK GSRVWLGTFN SAEEAARAYD VEARMIRGNK AKVNFPKEPT  60
VPQKRRARPT APKAPKRSVA HEPSVMSPIN NLANPNAFIY PSADFHQTSH LLCLTTCHLF  120
LQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72360.15e-31ERF family protein