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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC6BG015840.6 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | bZIP | ||||||||
| Protein Properties | Length: 324aa MW: 34233.4 Da PI: 6.0532 | ||||||||
| Description | bZIP family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | bZIP_1 | 70.6 | 2.5e-22 | 226 | 288 | 1 | 63 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
e+elk+++rk +NRe+ArrsR+RK+ae+eeL +++++L++eN++L+ el+++kke+++l s++
TRIDC6BG015840.6 226 ERELKKQKRKLSNRESARRSRLRKQAECEELGQRAEALKSENSSLRIELDRIKKEYEELLSKN 288
89***********************************************************98 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 324 aa Download sequence |
MGSNDPSTPP KASKPPEQEQ PPATTSGTTA PVYPEWPGFQ GYPAMPPHGF FPPPVAAGQA 60 HPYMWGAQHM VPPYGTPPPP YMMYPPGTVY AHPTAPGVHP FHYHMQTNGN LEPAGAQGAA 120 PGAAETNGKN EPGKTSGPSA NGVTSNSESG SDSESEGSDA NSQNDSHSKE NDVNENVQSG 180 AVIGVAGPAT NLNIGMDYWG ATGSSPVPAM RGKAPSGSAR GEQWDERELK KQKRKLSNRE 240 SARRSRLRKQ AECEELGQRA EALKSENSSL RIELDRIKKE YEELLSKNTS LKAKLGESGG 300 GGGDAVPDMN ERGDTNGGSH QKEP |
| Nucleic Localization Signal ? help Back to Top | |||
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| No. | Start | End | Sequence |
| 1 | 229 | 236 | LKKQKRKL |
| 2 | 243 | 249 | RRSRLRK |
| 3 | 243 | 250 | RRSRLRKQ |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT2G35530.1 | 2e-42 | bZIP family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC6BG015840.6 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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