PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6BG008940.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 127aa    MW: 13566 Da    PI: 6.7963
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6BG008940.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.93e-191263155
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                      ++y+GVr+++ +g+++AeIrd s    +  r +lg+f+taeeAa+a+++ + +++g
  TRIDC6BG008940.1 12 TKYRGVRRRP-WGKFAAEIRDSSR---HgVRMWLGTFDTAEEAAAAYDRSAYSMRG 63
                      69********.**********432...25*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
MAEGGEGSGS QTKYRGVRRR PWGKFAAEIR DSSRHGVRMW LGTFDTAEEA AAAYDRSAYS  60
MRGRNAVLNF PNQAHVYETE ASPGGGAGAG AGPSPSVAMT KVIELECLED GVLQEMLDGH  120
DKSSKSK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43410.13e-30ERF family protein