PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC6BG002060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | Trihelix | ||||||||
Protein Properties | Length: 173aa MW: 18328.6 Da PI: 5.1071 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 70.2 | 3.8e-22 | 2 | 62 | 26 | 86 |
trihelix 26 lkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 lk+plWeevs++m++ g+ rs+k+Ckekwen+nk+++k ke+ kkr + + +tcpyfd+l+ TRIDC6BG002060.1 2 LKGPLWEEVSARMAAAGYgGRSAKRCKEKWENINKYFRKAKESGKKR-PAHAKTCPYFDELD 62 689***************99*************************98.99999*******98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 173 aa Download sequence |
GLKGPLWEEV SARMAAAGYG GRSAKRCKEK WENINKYFRK AKESGKKRPA HAKTCPYFDE 60 LDRLYSRSSA HASGASSAAG NNTSTKATAN AITSADDAAN KASSELLDAV VKYPADTHYG 120 PPPGFPNDGG NADTKDDGEG DADMGRASGR AGEEHDDEAG QSHGHDDDDE DDH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G76890.2 | 6e-25 | Trihelix family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC6BG002060.1 |