PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG058590.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | LBD | ||||||||
Protein Properties | Length: 140aa MW: 15115.7 Da PI: 9.2327 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 113.1 | 1.9e-35 | 7 | 95 | 1 | 88 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqle 88 +C aCk+lrr+C+++Cv+apyf +eq +++fa++hk+FGasn kll++lp +r +a+ +++yeA+ r+rdPvyG+v+ i++lqqq++ TRIDC6AG058590.4 7 PCGACKFLRRRCVAECVFAPYFSSEQgAARFAAIHKVFGASNAAKLLAHLPLADRCEAVVTITYEAQSRLRDPVYGCVAQIFALQQQVR 95 7***********************9989***********************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 140 aa Download sequence |
AGVAGSPCGA CKFLRRRCVA ECVFAPYFSS EQGAARFAAI HKVFGASNAA KLLAHLPLAD 60 RCEAVVTITY EAQSRLRDPV YGCVAQIFAL QQQVRPALVS FFFSHLLPCR SLLRSINQSV 120 AILQAQLMQA RAQIACGVQS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42430.1 | 4e-55 | LBD family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG058590.4 |