PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG058060.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 671aa MW: 72983.4 Da PI: 7.4039

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG058060.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.8	5.1e-08	576	625	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E ellv+av++lG g+Wk + ++ + Rt ++k++w ++ TRIDC6AG058060.2 576 RRPFSVAEVELLVEAVELLGFGRWKNVKNHAFrdnEERTYVDLKDKWKNL 625 678999***********************9999**********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 671 aa Download sequence
MVFRKKSEGG SVVRRPRKPR DTTLAPVKRS ARLKKKQMYA LDLLATVAES LSSDEDDYST 60 ESDQDGAEAS HNSDRIAVKS EQFDEAPQLN STALENDCSR GYTVGCDGIC ASLGQTSIRK 120 TEDLSTQNVA DTVEGSLIEK ADADNLLTQN IADAAAEPLI EKKPDVFAEG SLVSCTKPSL 180 LDCGLGTIPE YGTIGVCHPC FPTSADVKQV HQATPAIIRS LVDGNAAALH GLVDTMDLDV 240 KPSVLNSESS SGVHLGGHDN GHKASPLYPV QVQHAADIDN DEKSTRCVLP STSGSKGGYL 300 SYKGDCRTRR LLSTRMRKAA RNKMCGELPN KGSKFCGKKI SATRRRAQMQ RMLKTKKVVE 360 CYSAQPSDEG VLTETSGTSC SRGGQDPTCA SESSQRKPCA SEGCNVKFII KSFNIPELSI 420 EVPENATVGS LKRIVMDAVT SKIEGSLSVS VLLQGKIIQD DNKTLHQAGI CHGAKPDSIG 480 FTLECEAKQD SRPSGLAPEE MDSAGPSVVN PLSKIKFEQP FISCTLGDYP YEGAAQVRSE 540 ICQAIVPYGT SNPDALAIVP VVPRSRQRDF GQRRKRRPFS VAEVELLVEA VELLGFGRWK 600 NVKNHAFRDN EERTYVDLKD KWKNLVHTAS IPPQLRRGRA IPPQDLLDRV LAAQAYWTVH 660 HAKRDEEEGR D

Sequence ? help Back to Top

Protein Sequence Length: 671 aa Download sequence

MVFRKKSEGG SVVRRPRKPR DTTLAPVKRS ARLKKKQMYA LDLLATVAES LSSDEDDYST  60
ESDQDGAEAS HNSDRIAVKS EQFDEAPQLN STALENDCSR GYTVGCDGIC ASLGQTSIRK  120
TEDLSTQNVA DTVEGSLIEK ADADNLLTQN IADAAAEPLI EKKPDVFAEG SLVSCTKPSL  180
LDCGLGTIPE YGTIGVCHPC FPTSADVKQV HQATPAIIRS LVDGNAAALH GLVDTMDLDV  240
KPSVLNSESS SGVHLGGHDN GHKASPLYPV QVQHAADIDN DEKSTRCVLP STSGSKGGYL  300
SYKGDCRTRR LLSTRMRKAA RNKMCGELPN KGSKFCGKKI SATRRRAQMQ RMLKTKKVVE  360
CYSAQPSDEG VLTETSGTSC SRGGQDPTCA SESSQRKPCA SEGCNVKFII KSFNIPELSI  420
EVPENATVGS LKRIVMDAVT SKIEGSLSVS VLLQGKIIQD DNKTLHQAGI CHGAKPDSIG  480
FTLECEAKQD SRPSGLAPEE MDSAGPSVVN PLSKIKFEQP FISCTLGDYP YEGAAQVRSE  540
ICQAIVPYGT SNPDALAIVP VVPRSRQRDF GQRRKRRPFS VAEVELLVEA VELLGFGRWK  600
NVKNHAFRDN EERTYVDLKD KWKNLVHTAS IPPQLRRGRA IPPQDLLDRV LAAQAYWTVH  660
HAKRDEEEGR D

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	2e-53	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG058060.2