PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG056720.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 224aa MW: 24046.9 Da PI: 8.6096 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.9 | 2.2e-17 | 53 | 105 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + ++GVr++ + grWv+e+r+p ++ +r +lg++ tae Aa+a++aa++ l+g TRIDC6AG056720.1 53 PVFRGVRRRGNAGRWVCEVRVPGDR--GTRLWLGTYFTAEAAARAHDAAMLMLRG 105 579******************9555..5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 224 aa Download sequence |
LRCQNASCHM ASGRDAATRS ASSSSTTERG GTAWPWPPKR PAGRTKFRET RHPVFRGVRR 60 RGNAGRWVCE VRVPGDRGTR LWLGTYFTAE AAARAHDAAM LMLRGRSAAC LNFRDSAWLL 120 SVPPAFSNLS DVRRAAVQAV ADFLRRPEAT GAAAGAGQEV TSSVAVQSSA ACSVPSSETA 180 QTSGDATFEE PGALSMDMFD LDCLFGETDS DTYYYANLAQ GLLM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 5e-30 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG056720.1 |