PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG052040.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 161aa MW: 17702.4 Da PI: 9.152 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 24.8 | 5.2e-08 | 122 | 158 | 2 | 36 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS- CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRt 36 ++WT++Ed l +v++ G g+W I r+ + +Rt TRIDC6AG052040.3 122 KAWTKDEDAELRAGVHKCGEGNWLDILRKYNfdSTRT 158 68**************************999777776 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 161 aa Download sequence |
RTSRTAAPSR WGDESDLECE IEPSPKPSNE AAAEASRFAK ILMYGPSREQ GSSHRANSDV 60 PLLNTPNEKI PRVSSDKQLA QSHRLTNGTG PVSNSKQAPH TGLSPDSFDG NGPHNKKTKK 120 TKAWTKDEDA ELRAGVHKCG EGNWLDILRK YNFDSTRTYG Q |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G09710.2 | 1e-09 | MYB_related family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG052040.3 |