PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG052040.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 901aa MW: 94209.8 Da PI: 10.2943

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG052040.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	25.1	4.1e-08	205	249	2	44
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqcksrw 44 ++WT++Ed l +v++ G g+W I r+ + +Rt q+ rw TRIDC6AG052040.2 205 KAWTKDEDAELRAGVHKCGEGNWLDILRKYNfdSTRTYGQLSQRW 249 68*****************************9999999999 PP

Sequence ? help Back to Top
Protein Sequence Length: 901 aa Download sequence
MASAAAAALA AAGKRQLPED DLYLILHKYS PATILTALQE VTQHAQRRSI DWRALVAKTA 60 TGITSAREYQ MLWRYIAYGH DFVENVEDGS PQPLGDESDL ECEIEPSPKP SNEAAAEASR 120 FAKILMYGPS REQGSSHRAN SDVPLLNTPN EKIPRVSSDK QLAQSHRLTN GTGPVSNSKQ 180 APHTGLSPDS FDGNGPHNKK TKKTKAWTKD EDAELRAGVH KCGEGNWLDI LRKYNFDSTR 240 TYGQLSQRWA VISRRQATTK PAKAKPVTGG YDMKATQKAF FMALDMPMGK PGGLSTLRSG 300 ASQQSTQHPA PVFGAAAPEL KSATSSSSFS LPVPVPSAAP GPVSAQVQVQ PPRAQQVPSQ 360 AAPSKVSNAS IKSRNSSKKQ TAQANPTNAP SSIQAAAIAA GGRIATASIA TNLLKAAQSP 420 QAVHIRSRGK GSSKTSTSSK ASTMAGEPGT QTGGAQHPEL PNCSAPTQSP TVLITQSTEQ 480 VNVVPEVAGV NPPEQSASAH LLEPDRTLST TPVPGPCDNM EIDDDSTFCV VTMEDLFPED 540 VKQPETVKQP EMVRQPETVR QPEMVRQTET VSQPEMVRQT ETVRQPEMVK QPETVRQPEM 600 VDPKAEEMID PKDADMLEFD RFVAQGCLTT DYSDKSKGVK IAPGAQGATA SQKKKQLPTV 660 GKSIPVFRAP VTMKKTKALP SHGATLASTV ASSGLVGTGN AGVLSKAIYR KPAGPGTTGK 720 QNRCQEIMAQ KQHAMNSNSS AMARNAAAGT GTPARNVAAG VGAPARNAAP ATGIRNTATG 780 TGTPPVRNTA PGTGAPPVRN TAPGTGTPPV RNMAPGPGTP AVRNTAPGTG TAARNSLTGT 840 GTPQARNLLT GTGTPPARNA APVTGATPAR NLLTGTGTPP AIRQHNPAVN GASKGNPPAS 900 Q

Sequence ? help Back to Top

Protein Sequence Length: 901 aa Download sequence

MASAAAAALA AAGKRQLPED DLYLILHKYS PATILTALQE VTQHAQRRSI DWRALVAKTA  60
TGITSAREYQ MLWRYIAYGH DFVENVEDGS PQPLGDESDL ECEIEPSPKP SNEAAAEASR  120
FAKILMYGPS REQGSSHRAN SDVPLLNTPN EKIPRVSSDK QLAQSHRLTN GTGPVSNSKQ  180
APHTGLSPDS FDGNGPHNKK TKKTKAWTKD EDAELRAGVH KCGEGNWLDI LRKYNFDSTR  240
TYGQLSQRWA VISRRQATTK PAKAKPVTGG YDMKATQKAF FMALDMPMGK PGGLSTLRSG  300
ASQQSTQHPA PVFGAAAPEL KSATSSSSFS LPVPVPSAAP GPVSAQVQVQ PPRAQQVPSQ  360
AAPSKVSNAS IKSRNSSKKQ TAQANPTNAP SSIQAAAIAA GGRIATASIA TNLLKAAQSP  420
QAVHIRSRGK GSSKTSTSSK ASTMAGEPGT QTGGAQHPEL PNCSAPTQSP TVLITQSTEQ  480
VNVVPEVAGV NPPEQSASAH LLEPDRTLST TPVPGPCDNM EIDDDSTFCV VTMEDLFPED  540
VKQPETVKQP EMVRQPETVR QPEMVRQTET VSQPEMVRQT ETVRQPEMVK QPETVRQPEM  600
VDPKAEEMID PKDADMLEFD RFVAQGCLTT DYSDKSKGVK IAPGAQGATA SQKKKQLPTV  660
GKSIPVFRAP VTMKKTKALP SHGATLASTV ASSGLVGTGN AGVLSKAIYR KPAGPGTTGK  720
QNRCQEIMAQ KQHAMNSNSS AMARNAAAGT GTPARNVAAG VGAPARNAAP ATGIRNTATG  780
TGTPPVRNTA PGTGAPPVRN TAPGTGTPPV RNMAPGPGTP AVRNTAPGTG TAARNSLTGT  840
GTPQARNLLT GTGTPPARNA APVTGATPAR NLLTGTGTPP AIRQHNPAVN GASKGNPPAS  900
Q

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	6e-39	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG052040.2