PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG052040.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 779aa MW: 81047.1 Da PI: 9.9987

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG052040.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.1	1.7e-07	205	245	2	40
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS-HHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg..kgRtlkqc 40 ++WT++Ed l +v++ G g+W I r+ + +Rt + c TRIDC6AG052040.1 205 KAWTKDEDAELRAGVHKCGEGNWLDILRKYNfdSTRTCNVC 245 68****************************99988987766 PP

Sequence ? help Back to Top
Protein Sequence Length: 779 aa Download sequence
MASAAAAALA AAGKRQLPED DLYLILHKYS PATILTALQE VTQHAQRRSI DWRALVAKTA 60 TGITSAREYQ MLWRYIAYGH DFVENVEDGS PQPLGDESDL ECEIEPSPKP SNEAAAEASR 120 FAKILMYGPS REQGSSHRAN SDVPLLNTPN EKIPRVSSDK QLAQSHRLTN GTGPVSNSKQ 180 APHTGLSPDS FDGNGPHNKK TKKTKAWTKD EDAELRAGVH KCGEGNWLDI LRKYNFDSTR 240 TCNVCCSFQR WAVISRRQAT TKPAKAKPVT GGYDMKATQK AFFMALDMPM GKPGGLSTLR 300 SGASQQSTQH PAPVFGAAAP ELKSATSSSS FSLPVPVPSA APGPVSAQVQ VQPPRAQQVP 360 SQAAPSKVSN ASIKSRNSSK KQTAQANPTN APSSIQAAAI AAGGRIATAS IATNLLKAAQ 420 SPQAVHIRSR GKGSSKTSTS SKASTMAGEP GTQTGGAQHP ELPNCSAPTQ SPTVLITQST 480 EQVNVVPEVA GVNPPEQSAS AHLLEPDRTL STTPVPGPCD NMEIDDDSTF CVVTMEDLFP 540 EDVKQPEMVD PKAEEMIDPK DADMLEFDRF VAQGCLTTDY SDKSKGVKIA PGAQGATASQ 600 KKKQLPTVGK SIPVFRAPVT MKKTKALPSH GATLASTVAS SGLVGTGNAG VLSKAIYRKP 660 AGPGTTGKQN RCQEIMAQKQ HAMNSNSSAM ARNAAAGTGT PARNVAAGVG APARNAAPAT 720 GTPAKSAAPA TGTPAKNAAP ASGTPARNTA PGTGTPPVRN TAPGTGTPPI RNMAPGTGT

Sequence ? help Back to Top

Protein Sequence Length: 779 aa Download sequence

MASAAAAALA AAGKRQLPED DLYLILHKYS PATILTALQE VTQHAQRRSI DWRALVAKTA  60
TGITSAREYQ MLWRYIAYGH DFVENVEDGS PQPLGDESDL ECEIEPSPKP SNEAAAEASR  120
FAKILMYGPS REQGSSHRAN SDVPLLNTPN EKIPRVSSDK QLAQSHRLTN GTGPVSNSKQ  180
APHTGLSPDS FDGNGPHNKK TKKTKAWTKD EDAELRAGVH KCGEGNWLDI LRKYNFDSTR  240
TCNVCCSFQR WAVISRRQAT TKPAKAKPVT GGYDMKATQK AFFMALDMPM GKPGGLSTLR  300
SGASQQSTQH PAPVFGAAAP ELKSATSSSS FSLPVPVPSA APGPVSAQVQ VQPPRAQQVP  360
SQAAPSKVSN ASIKSRNSSK KQTAQANPTN APSSIQAAAI AAGGRIATAS IATNLLKAAQ  420
SPQAVHIRSR GKGSSKTSTS SKASTMAGEP GTQTGGAQHP ELPNCSAPTQ SPTVLITQST  480
EQVNVVPEVA GVNPPEQSAS AHLLEPDRTL STTPVPGPCD NMEIDDDSTF CVVTMEDLFP  540
EDVKQPEMVD PKAEEMIDPK DADMLEFDRF VAQGCLTTDY SDKSKGVKIA PGAQGATASQ  600
KKKQLPTVGK SIPVFRAPVT MKKTKALPSH GATLASTVAS SGLVGTGNAG VLSKAIYRKP  660
AGPGTTGKQN RCQEIMAQKQ HAMNSNSSAM ARNAAAGTGT PARNVAAGVG APARNAAPAT  720
GTPAKSAAPA TGTPAKNAAP ASGTPARNTA PGTGTPPVRN TAPGTGTPPI RNMAPGTGT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	1e-34	MYB_related family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG052040.1