PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG051470.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 345aa    MW: 38820 Da    PI: 7.9397
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG051470.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.18.9e-1862111255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +++G+r+++ +g+W+AeIrdp     + +r++lg+f +aeeAa+a++  + +++g
  TRIDC6AG051470.1  62 QFRGIRQRP-WGKWAAEIRDPI----KgARVWLGTFNSAEEAARAYDVEAHRIRG 111
                       69*******.**********72....46***********************9998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 345 aa     Download sequence    
GDSDLELRHD GVADEDNNDE VVEIKPFVAI RRSLSKDDLS TRTIAGFDGP AQRPGKRKRK  60
NQFRGIRQRP WGKWAAEIRD PIKGARVWLG TFNSAEEAAR AYDVEAHRIR GKKAKLNFPD  120
EPTIPQDRCV LHVIPKVPKP STTQEHSFIP ALNNLANQND FFYPSANFTS NQPLVRLDNM  180
PFVPAMSSVT PVEVPAMNMY YDRRSNTFGC SKLGRDYYTK TPNISSIAPI STIAEGEGST  240
PIKSNTNNSV VPPVMENNGV NLEPWMRYLM DDSVDKMINS LLNFDVPRDV VGNMDFGASM  300
TCPSVVNFSE RIKPYISGKM CFRNKTMEDL EALYYLRLAY ASIEA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.13e-34ERF family protein