PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG051460.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 379aa    MW: 42649.9 Da    PI: 8.7424
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG051460.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.62.7e-17104153255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +++G+r+++ rg+W+AeIrdp     +  +++lg+f +aeeAa+a++  + +++g
  TRIDC6AG051460.1 104 QFRGIRQRP-RGKWAAEIRDPI----KgSYVWLGTFNSAEEAARAYDVEACRIRG 153
                       69*******.8*********72....46**********************99998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
RRSPAGRWSE SMVRDAQLAW ARARLRHDDE AFNADFEDFD ANSGYFNLER GHGAISSEDE  60
NDKVVEINPL AAKRSISKDD LSTRTSAGFD GPAQRPGKRK RKNQFRGIRQ RPRGKWAAEI  120
RDPIKGSYVW LGTFNSAEEA ARAYDVEACR IRGKKAKLNF PDEPTIPQNH RVLHVIPNKV  180
PKPSTTQEHS FIPALNNLAN QNDFVYPSAN FTSNQPLVQL DNMPFVPAMS SVTPVEVPAM  240
NLYHDRRSNT FGCSKLGREY YTKTPDISSI SPISTIAEGE GSTPIKSNTN NSMVHPVMEN  300
NGVNLEPWMR YLMDDSVDEM ISSLLNFDVP RDVVGNMDFG ASMTCPSVIN FSQRIKPYIS  360
EKNGIRLWKI WKHSIASSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47520.18e-31ERF family protein