PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG050080.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 229aa    MW: 24941 Da    PI: 10.7383
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG050080.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.16.3e-3373129158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       dep++VN+KQy++Il+RRq Rakle+++kl +k+rkpylheSRh hA++R+RgsgGrF
  TRIDC6AG050080.4  73 DEPIFVNPKQYNGILRRRQLRAKLEAQNKL-TKNRKPYLHESRHLHAMKRARGSGGRF 129
                       79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MRSTLTFGDK HSVYAGQNTD YGHPMACISY PFNDSGSGVW AAYGSRAMFQ PLMAGGGASA  60
TARVPLPVEL AADEPIFVNP KQYNGILRRR QLRAKLEAQN KLTKNRKPYL HESRHLHAMK  120
RARGSGGRFL NSKQLKQQQQ SGSACTKAIA DGANSLGSTH LRLGSGPAGD RTNSVSKAMS  180
SQENSKRVAA PAPAFTMIQA ARKDDDFFHH HAHHLSFSGH FGQSSDRYT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G54160.13e-34NF-YA family protein