PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG049850.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bZIP | ||||||||
Protein Properties | Length: 277aa MW: 29660 Da PI: 12.5408 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.1 | 2.2e-09 | 245 | 268 | 5 | 28 |
CHHHCHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaei 28 +r+rr++kNRe+A rsRqRK+a+i TRIDC6AG049850.5 245 RRQRRMIKNRESAARSRQRKQAYI 268 79********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 277 aa Download sequence |
AAAADDAAAA DAPGVVGLLA HVRRVPERAR RAGQGLRVHE HGRAPPQHLD GRGVAGHRRR 60 PQRRGLLLRR GGAGPRRHPA PGLAHAAPDA QPEDRRRGLA RHDVLRRTLR LRLRRRRGSP 120 AGPEAADARG GHSRGVPRAR RRRARGHAGA AMLFPQSNMF APMVNPLSLA NGLMTGAYGQ 180 GGGGGGGGAA AMVSPSPTGR PVMSNGYGKM EGLNLSSLSP PPMPYVFSGG LRGRKPPAME 240 KVVERRQRRM IKNRESAARS RQRKQAYIIY VKSTSAY |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 95 | 117 | RRRGLARHDVLRRTLRLRLRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G45249.1 | 2e-18 | bZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG049850.5 |