PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC6AG049480.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 230aa MW: 24247.7 Da PI: 4.4845 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.9 | 2.5e-18 | 31 | 80 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +ykGVr ++ +g+Wv+eIr p ++++r++lg++ tae Aa+a++aa ++l+g TRIDC6AG049480.1 31 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLRG 80 69****998.**********9...336*************************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 230 aa Download sequence |
QQVALGGDGG NAAAARQGGG GGGRQQQQQQ QYKGVRMRSW GSWVSEIRAP NQKTRIWLGS 60 YSTAEAAARA YDAALLCLRG SAADLNFPVH LPFHVPAAAM SPKSIQRVAA AAAATAGSPL 120 QPPHTMASSA SWPGAAPPCG YGDNAPSFGS PEDQSARHSN ADDDETMAHG DDGVDYDALA 180 DIDAFFQSPK CMDYATMMDP CSTFFAPAPM APVEWEEEGE ISLWSFSSYN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G21910.1 | 5e-27 | ERF family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC6AG049480.1 |