PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG044800.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 220aa MW: 23637.6 Da PI: 7.397

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG044800.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46	1.2e-14	14	59	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv +G +W+++++ R++k+c++rw +yl TRIDC6AG044800.3 14 KGPWTAEEDQKLVAFLLSHGHCCWRLVPKLAV--RCGKSCRLRWTNYL 59 79***************************9..**********97 PP
2	Myb_DNA-binding	50.2	5.8e-16	68	111	4	47
S-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqky 47 + +E++l +d++ qlG++ W++Ia++++ gRt++++k++w+++ TRIDC6AG044800.3 68 LSDDEEKLVIDLHSQLGNRcVWSKIAARLP-GRTDNEIKNHWNTH 111 589*************************.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MGRQPCCEKV GLKKGPWTAE EDQKLVAFLL SHGHCCWRLV PKLAVRCGKS CRLRWTNYLR 60 PDLKRGLLSD DEEKLVIDLH SQLGNRCVWS KIAARLPGRT DNEIKNHWNT HIRKKLKKMG 120 LDPVTHQPVA ASRADPLEDL QQEHCDDKAS SQESAGSGTG AGAEEEAPTS AEPKQGAACS 180 ASTASAVSPS PCSSSSASAS ASAATPGGGD VDWPDPLDLF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G66230.1	9e-77	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG044800.3