PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC6AG044320.4 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | HD-ZIP | ||||||||
Protein Properties | Length: 205aa MW: 22213.6 Da PI: 4.6584 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.4 | 1.2e-18 | 3 | 48 | 11 | 56 |
HHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 11 qleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 q++ Le+ Fe+++++ e+++eLA+klgL+ rqV vWFqNrRa++k TRIDC6AG044320.4 3 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWK 48 999******************************************9 PP | |||||||
2 | HD-ZIP_I/II | 119 | 2.5e-38 | 3 | 85 | 10 | 92 |
HD-ZIP_I/II 10 qvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 qv+lLE+sFeee+kLeperK+elar+LglqprqvavWFqnrRAR+ktk lE+d+++Lk+++dal++++++L +++++Lr+++ TRIDC6AG044320.4 3 QVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKTLERDFDRLKASFDALRADHDALLQDNHRLRSQVV 85 9******************************************************************************9986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 205 aa Download sequence |
RVQVHLLERS FEEENKLEPE RKTELARKLG LQPRQVAVWF QNRRARWKTK TLERDFDRLK 60 ASFDALRADH DALLQDNHRL RSQVVTLTEK MQDKEAPEGS FGAAADASEP EQAAAEAKAS 120 LADAEEQAAA AEAFEVVQQQ LHVKDEERLS PGSGGSAVLD ARDALLGSGC GLAGVVDSSV 180 DSYCFPGGAG GDEYHECVVG PVAGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G01470.1 | 6e-46 | HD-ZIP family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC6AG044320.4 |