PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG044320.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 340aa    MW: 37062.6 Da    PI: 4.3872
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG044320.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox64.51.5e-2076129356
                       --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
          Homeobox   3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 
                       k++++t+eq++ Le+ Fe+++++  e+++eLA+klgL+ rqV vWFqNrRa++k
  TRIDC6AG044320.2  76 KKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWK 129
                       5678*************************************************9 PP
2HD-ZIP_I/II130.66.2e-4275166192
       HD-ZIP_I/II   1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 
                       ekkrrl+ eqv+lLE+sFeee+kLeperK+elar+LglqprqvavWFqnrRAR+ktk lE+d+++Lk+++dal++++++L +++++Lr+++ 
  TRIDC6AG044320.2  75 EKKRRLTPEQVHLLERSFEEENKLEPERKTELARKLGLQPRQVAVWFQNRRARWKTKTLERDFDRLKASFDALRADHDALLQDNHRLRSQVV 166
                       69**************************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MEPGRLIFNT SGSGNGQMLF MDCGAGGIAG AAGMFHRGVR PVLGGMEEGR GVKRPFFTSP  60
DDMLEEEYYD EQLPEKKRRL TPEQVHLLER SFEEENKLEP ERKTELARKL GLQPRQVAVW  120
FQNRRARWKT KTLERDFDRL KASFDALRAD HDALLQDNHR LRSQVVTLTE KMQDKEAPEG  180
SFGAAADASE PEQAAAEAKA SLADAEEQAA AAEAFEVVQQ QLHVKDEERL SPGSGGSAVL  240
DARDALLGSG CGLAGVVDSS VDSYCFPGGA GGDEYHECVV GPVAGGIHSE EDDGAGSDEG  300
CSYYPDDAAV FFAAAQGHGH HHTDDDDQQD DGQISYWMWN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01470.16e-58HD-ZIP family protein