PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG040100.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 102aa    MW: 11816.1 Da    PI: 9.8126
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG040100.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like21.16.8e-074793153
           G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkY 53
                      k+r +Wt+e H+rF+ea++   G   A  ++i e+++ k  t  +++SH Qk+
  TRIDC6AG040100.7 47 KQREKWTEEEHKRFLEALQLH-GR--A-WRRIQEHIGTK--TAVQIRSHAQKF 93
                      79****************866.43..3.58999999988..8999******98 PP
2Myb_DNA-binding574.6e-184993147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT+eE++++++a +++G   W++I +++g ++t+ q++s+ qk+
  TRIDC6AG040100.7 49 REKWTEEEHKRFLEALQLHGRA-WRRIQEHIG-TKTAVQIRSHAQKF 93
                      789*****************88.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 102 aa     Download sequence    
MACTQENAMA TDESTGDHRG SRPSSHDMDL SGDDHVPKAR KPYTITKQRE KWTEEEHKRF  60
LEALQLHGRA WRRIQEHIGT KTAVQIRSHA QKFFSKVTRE SS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17300.16e-40MYB_related family protein