PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG040100.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 226aa    MW: 24255.8 Da    PI: 10.3421
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG040100.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.82.2e-174791147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                      r +WT+eE++++++a +++G   W++I +++g ++t+ q++s+ qk+
  TRIDC6AG040100.6 47 REKWTEEEHKRFLEALQLHGRA-WRRIQEHIG-TKTAVQIRSHAQKF 91
                      789*****************88.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
GLYENAMATD ESTGDHRGSR PSSHDMDLSG DDHVPKARKP YTITKQREKW TEEEHKRFLE  60
ALQLHGRAWR RIQEHIGTKT AVQIRSHAQK FFSKVTRESS GSSSGSGAAA ATATAAIQIP  120
PPRPKRKPTH PYPRKADDGA AAGGKHGPGL THLERPPVRM GEQEEGSPTS VLTASRVEAS  180
GGRFSNNSSG SRSPVPSAAG SLYGSSVDRG DGCLSPNTKL SILTHF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17300.19e-38MYB_related family protein