PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG039910.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 266aa MW: 30235.2 Da PI: 8.9243

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG039910.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	100	9.3e-32	9	58	1	50
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krienk+nrqvtfskRrng+lKKA+ELSvLCdaeva+iifss+gklye+ TRIDC6AG039910.3 9 KRIENKINRQVTFSKRRNGLLKKAYELSVLCDAEVALIIFSSRGKLYEFG 58 79**********************************************95 PP
2	K-box	103.3	3.2e-34	78	170	6	98
K-box 6 gksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 +++ + ++++s++qe++kLk++ e Lqr+qRhllGedL++Ls+keLqqLe+qLe sl+ R++K++l++eq+eel++ke++l ++n++L++kl TRIDC6AG039910.3 78 DSNGALSETQSWYQEMSKLKAKFEALQRTQRHLLGEDLGPLSVKELQQLEKQLECSLSLARQRKTQLMMEQVEELRRKERQLGDINRQLKHKL 170 344466788*********************************************************************************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MGRGRVELKR IENKINRQVT FSKRRNGLLK KAYELSVLCD AEVALIIFSS RGKLYEFGSA 60 GTTKTLERYQ HCCYNAQDSN GALSETQSWY QEMSKLKAKF EALQRTQRHL LGEDLGPLSV 120 KELQQLEKQL ECSLSLARQR KTQLMMEQVE ELRRKERQLG DINRQLKHKL LPSLQLDAEG 180 SNSNNYRAMQ QITWAAGTVV DEGAAAYHMQ QQQQQQHPNH SAAMDCEPTL QIGYPHQFAA 240 PDQAANNIPR SSAPGGENNF MLGWVL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	7e-95	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG039910.3