PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG039570.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | ERF | ||||||||
Protein Properties | Length: 217aa MW: 23195.9 Da PI: 4.9309 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.6 | 1.6e-18 | 54 | 104 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 + ykGVr++ grWv+e+r+p + +r++lg+f tae+Aa+a++ a+++l+g TRIDC6AG039570.1 54 PVYKGVRRRN-PGRWVCEVREP-----HskQRIWLGTFETAEMAARAHDVAALALRG 104 68*****887.9******9996.....335*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MDLSALSSDY SSGTPSPVGA DGGNSEGFSA YMTVSSAPPK RRAGRTKFKE TRHPVYKGVR 60 RRNPGRWVCE VREPHSKQRI WLGTFETAEM AARAHDVAAL ALRGRAACLN FADSPRRLRV 120 PPVGASPDEI RRAAVEAAEA FLPAPDQSNA AAEEVAVAPT EQFAGDPYYG MDDGMDFGMQ 180 GYLDMAQGML IAPPPMAGPS ATVGDGDDDG EVSLWSY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G25480.1 | 2e-38 | ERF family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG039570.1 |