PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC6AG036490.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB_related | ||||||||
Protein Properties | Length: 247aa MW: 26949.5 Da PI: 10.4478 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 28.9 | 2.6e-09 | 62 | 99 | 1 | 36 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT..TTS- CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg..kgRt 36 +g W++eEd++l d++ ++G g+W++ +++ g +R+ TRIDC6AG036490.2 62 KGLWSPEEDQKLRDYILRHGHGCWSALPAKAGkaDHRS 99 678***************************99666666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
PERSSISIPR LEPEASAAAA AASCRPTSPR FRAALRRSSA CKQASKAMGC KACDKPRPSY 60 RKGLWSPEED QKLRDYILRH GHGCWSALPA KAGKADHRSL VRICRSTERR HNSGEFGAFG 120 SKIGFSGTGD RRPSTEFRPL SGQLVRIGLD LFVGVISSIC PEREMHIGWL VLTSDHDSAR 180 RAPAERQELQ AAVDQLPAAG AEARHVLAGG GGDGDEPPRR PRQQVSSPVQ HTPFTYLLSA 240 LYFTARK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48920.1 | 7e-13 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC6AG036490.2 |