PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG036260.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ERF

Protein Properties

Length: 466aa MW: 50316.4 Da PI: 8.4542

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG036260.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.8	6.3e-19	220	270	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge TRIDC6AG036260.3 220 LYRGVRQRH-WGKWVAEIRLPRN---RTRMWLGTFDTAEDAAMAYDREAFKLRGE 270 59****9.******955...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
ERVVGMDVAD SGGGVRGRER RWKGKAASSA AEKQQQQQLA PVLEDAPAAA LLPPLKKMRS 60 PDCRLRRSVS SLSSAPASPD SSSVSNPLSP PATSLPPHVS STRQIFPFAY DPSPAAAPRL 120 LQLLRYSSSL YQQPMLPQQL QQQQQQHTPS QHPQMISFGD AQQQQQLEAA AALIPPHYMA 180 PEALRYWSAA LNLSPRGVLG GVVPPALYQH LLRPPGPAKL YRGVRQRHWG KWVAEIRLPR 240 NRTRMWLGTF DTAEDAAMAY DREAFKLRGE NARLNFPDLF LGKGRSGGSG RTSASAAASA 300 SSSSTSAPPT PDETHAQQAQ LLLQREQQQQ HTDEQANIRQ KPLLSAAEQG GLPEPEQNPQ 360 LQNAEQQCSD GSTAMMQQAP VTPGGVWGPA DDAWFSAWGP GSSVWDYDMD SAHGLLLQSR 420 FAGDQAGMDY VPTAPEAHVA PAAGTGTACA APPSPLPPRP PFMWKD

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

ERVVGMDVAD SGGGVRGRER RWKGKAASSA AEKQQQQQLA PVLEDAPAAA LLPPLKKMRS  60
PDCRLRRSVS SLSSAPASPD SSSVSNPLSP PATSLPPHVS STRQIFPFAY DPSPAAAPRL  120
LQLLRYSSSL YQQPMLPQQL QQQQQQHTPS QHPQMISFGD AQQQQQLEAA AALIPPHYMA  180
PEALRYWSAA LNLSPRGVLG GVVPPALYQH LLRPPGPAKL YRGVRQRHWG KWVAEIRLPR  240
NRTRMWLGTF DTAEDAAMAY DREAFKLRGE NARLNFPDLF LGKGRSGGSG RTSASAAASA  300
SSSSTSAPPT PDETHAQQAQ LLLQREQQQQ HTDEQANIRQ KPLLSAAEQG GLPEPEQNPQ  360
LQNAEQQCSD GSTAMMQQAP VTPGGVWGPA DDAWFSAWGP GSSVWDYDMD SAHGLLLQSR  420
FAGDQAGMDY VPTAPEAHVA PAAGTGTACA APPSPLPPRP PFMWKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	1e-36	ERF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG036260.3