PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG036260.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ERF

Protein Properties

Length: 465aa MW: 50187.3 Da PI: 8.7559

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG036260.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	59.8	6.3e-19	219	269	2	56
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 y+GVr+++ +g+WvAeIr p++ r+r +lg+f+tae+Aa a+++ + kl+ge TRIDC6AG036260.2 219 LYRGVRQRH-WGKWVAEIRLPRN---RTRMWLGTFDTAEDAAMAYDREAFKLRGE 269 59****9.******955...5************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
RVVGMDVADS GGGVRGRERR WKGKAASSAA EKQQQQQLAP VLEDAPAAAL LPPLKKMRSP 60 DCRLRRSVSS LSSAPASPDS SSVSNPLSPP ATSLPPHVSS TRQIFPFAYD PSPAAAPRLL 120 QLLRYSSSLY QQPMLPQQLQ QQQQQHTPSQ HPQMISFGDA QQQQQLEAAA ALIPPHYMAP 180 EALRYWSAAL NLSPRGVLGG VVPPALYQHL LRPPGPAKLY RGVRQRHWGK WVAEIRLPRN 240 RTRMWLGTFD TAEDAAMAYD REAFKLRGEN ARLNFPDLFL GKGRSGGSGR TSASAAASAS 300 SSSTSAPPTP DETHAQQAQL LLQREQQQQH TDEQANIRQK PLLSAAEQGG LPEPEQNPQL 360 QNAEQQCSDG STAMMQQAPV TPGGVWGPAD DAWFSAWGPG SSVWDYDMDS AHGLLLQSRF 420 AGDQAGMDYV PTAPEAHVAP AAGTGTACAA PPSPLPPRPP FMWKD

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

RVVGMDVADS GGGVRGRERR WKGKAASSAA EKQQQQQLAP VLEDAPAAAL LPPLKKMRSP  60
DCRLRRSVSS LSSAPASPDS SSVSNPLSPP ATSLPPHVSS TRQIFPFAYD PSPAAAPRLL  120
QLLRYSSSLY QQPMLPQQLQ QQQQQHTPSQ HPQMISFGDA QQQQQLEAAA ALIPPHYMAP  180
EALRYWSAAL NLSPRGVLGG VVPPALYQHL LRPPGPAKLY RGVRQRHWGK WVAEIRLPRN  240
RTRMWLGTFD TAEDAAMAYD REAFKLRGEN ARLNFPDLFL GKGRSGGSGR TSASAAASAS  300
SSSTSAPPTP DETHAQQAQL LLQREQQQQH TDEQANIRQK PLLSAAEQGG LPEPEQNPQL  360
QNAEQQCSDG STAMMQQAPV TPGGVWGPAD DAWFSAWGPG SSVWDYDMDS AHGLLLQSRF  420
AGDQAGMDYV PTAPEAHVAP AAGTGTACAA PPSPLPPRPP FMWKD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20880.1	9e-37	ERF family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG036260.2