PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG035210.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 257aa    MW: 27904 Da    PI: 5.6579
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG035210.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.41.2e-161461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT+eEd  lv  ++q+G  +W++ ++  g+ R++k+c++rw +yl
  TRIDC6AG035210.1 14 RGPWTAEEDMTLVAHIEQHGHSNWRALPKQAGLLRCGKSCRLRWINYL 61
                      89******************************99************97 PP
2Myb_DNA-binding52.79.9e-1767112148
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                       rg++T eE+e +++++++lG++ W+tIa++++ gRt++++k+ w+++l
  TRIDC6AG035210.1  67 RGNFTCEEEEAIIQLHAMLGNR-WSTIAARLP-GRTDNEIKNVWHTHL 112
                       89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 257 aa     Download sequence    
MGRAPCCEKM GLKRGPWTAE EDMTLVAHIE QHGHSNWRAL PKQAGLLRCG KSCRLRWINY  60
LRPDIKRGNF TCEEEEAIIQ LHAMLGNRWS TIAARLPGRT DNEIKNVWHT HLKKRLESSS  120
KTSGQAAPKR KAKKPAVAAT ASALEGPTSE PASSSPGQSL SMSPEQSLST SSATGYSMAS  180
SLENTGSSSS ESEEFQIDDS FWSETLAMSV DSSGSGMETG DTFGVDSAST SSSSNDEMDF  240
WVTLFMQASD IESLSQI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.16e-76MYB family protein