PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG033760.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 813aa MW: 91771 Da PI: 8.9452

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG033760.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	55.7	1.7e-17	53	136	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA++vGF v++++s+ s ++g++ +++C k g+++ e k r+ra++ t+C a+++vk++ d+ +v+ +l+HnH+++ TRIDC6AG033760.2 53 RFYRRYARRVGFGVSVRRSSFS-QEGTCLYLELMCCKGGRPRYEPKF-----RKRASSTTNCPARIRVKLWGDKLLHVELANLDHNHPVS 136 5***************9999.6677************9988.....99*******************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 813 aa Download sequence
METEGAVPPP KNPRRPRRRD LNALDPYLEE SDGQDIGIPE VGMVFNNHME VNRFYRRYAR 60 RVGFGVSVRR SSFSQEGTCL YLELMCCKGG RPRYEPKFRK RASSTTNCPA RIRVKLWGDK 120 LLHVELANLD HNHPVSPAMA RFLNSYKQLS GPAKRRLRMG GPGAMPVEEP SKMPVDKLGA 180 LEELLFGESK NHSFVERGRL KLQPGDSEAL RLFFTRMQAK NANFFNVIDL DDEGCVRNVF 240 WADAWSRAMY EYYNDAITLD TSYVVSKHDM PLVTFLGVNH HGQSVLLGCG LLSDETAETY 300 TWLFKAWVAC MSGNLPKAII TDQCRGIQSA VAEVVPGVRH RICLHQIMKK AAEQLSGLSE 360 YKAISKALQK AAYDSLTVDE FEGEWSTLIT YNGLQGHDWL RSLYECRFSW VPIFLKDAFW 420 AGMSATQRSE TITPFFEGYV DLKTSLKQFL GKYEMILQSK YEKEAQADFE TFHKQRPPVS 480 KFYMEEQLSK VYTHNMFKKL QDEIEAIMYC HVSLMNGDGP ISTFNVKECI FLEDGKRTMS 540 KIFAVTYNTE EKDITCICGG FQFSGILCRH SLSVLKFQQV REVPSQYVLD RWKKDFRQLH 600 VMGRLSSDVV PDNRVDRYDY LSMRCLQLVD SAVLSDKYRL ALRLVREVEK FLLNSNTHDD 660 TQPRIKSRIP KVKPNTVTGQ NLVNVVTDNG NGGPKGPEAS ASAQASQIQK GVAEKAVVPA 720 GYIGVPANVQ QFMGNQAAMR PSIVYMVPSG VDPQAFGNGV LMPVMYQQMF QIPQQPNGAA 780 QDTLANGKRK RPRAQKPTET SHQSNGTSGP AAG

Sequence ? help Back to Top

Protein Sequence Length: 813 aa Download sequence

METEGAVPPP KNPRRPRRRD LNALDPYLEE SDGQDIGIPE VGMVFNNHME VNRFYRRYAR  60
RVGFGVSVRR SSFSQEGTCL YLELMCCKGG RPRYEPKFRK RASSTTNCPA RIRVKLWGDK  120
LLHVELANLD HNHPVSPAMA RFLNSYKQLS GPAKRRLRMG GPGAMPVEEP SKMPVDKLGA  180
LEELLFGESK NHSFVERGRL KLQPGDSEAL RLFFTRMQAK NANFFNVIDL DDEGCVRNVF  240
WADAWSRAMY EYYNDAITLD TSYVVSKHDM PLVTFLGVNH HGQSVLLGCG LLSDETAETY  300
TWLFKAWVAC MSGNLPKAII TDQCRGIQSA VAEVVPGVRH RICLHQIMKK AAEQLSGLSE  360
YKAISKALQK AAYDSLTVDE FEGEWSTLIT YNGLQGHDWL RSLYECRFSW VPIFLKDAFW  420
AGMSATQRSE TITPFFEGYV DLKTSLKQFL GKYEMILQSK YEKEAQADFE TFHKQRPPVS  480
KFYMEEQLSK VYTHNMFKKL QDEIEAIMYC HVSLMNGDGP ISTFNVKECI FLEDGKRTMS  540
KIFAVTYNTE EKDITCICGG FQFSGILCRH SLSVLKFQQV REVPSQYVLD RWKKDFRQLH  600
VMGRLSSDVV PDNRVDRYDY LSMRCLQLVD SAVLSDKYRL ALRLVREVEK FLLNSNTHDD  660
TQPRIKSRIP KVKPNTVTGQ NLVNVVTDNG NGGPKGPEAS ASAQASQIQK GVAEKAVVPA  720
GYIGVPANVQ QFMGNQAAMR PSIVYMVPSG VDPQAFGNGV LMPVMYQQMF QIPQQPNGAA  780
QDTLANGKRK RPRAQKPTET SHQSNGTSGP AAG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	14	19	RRPRRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-135	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG033760.2