PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG033760.10

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 643aa MW: 73421.9 Da PI: 8.4465

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG033760.10	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	23.6	1.7e-07	18	58	50	90
FAR1 50 kerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + r+ra++ t+C a+++vk++ d+ +v+ +l+HnH+++ TRIDC6AG033760.10 18 PKFRKRASSTTNCPARIRVKLWGDKLLHVELANLDHNHPVS 58 56789*********************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 643 aa Download sequence
TTWRSTDSTV GGRPRYEPKF RKRASSTTNC PARIRVKLWG DKLLHVELAN LDHNHPVSPA 60 MARFLNSYKQ LSGPAKRRLR MGGPGAMPVE EPSKMPVDKL GALEELLFGE SKNHSFVERG 120 RLKLQPGDSE ALRLFFTRMQ AKNANFFNVI DLDDEGCVRN VFWADAWSRA MYEYYNDAIT 180 LDTSYVVSKH DMPLVTFLGV NHHGQSVLLG CGLLSDETAE TYTWLFKAWV ACMSGNLPKA 240 IITDQCRGIQ SAVAEVVPGV RHRICLHQIM KKAAEQLSGL SEYKAISKAL QKAAYDSLTV 300 DEFEGEWSTL ITYNGLQGHD WLRSLYECRF SWVPIFLKDA FWAGMSATQR SETITPFFEG 360 YVDLKTSLKQ FLGKYEMILQ SKYEKEAQAD FETFHKQRPP VSKFYMEEQL SKVYTHNMFK 420 KLQDEIEAIM YCHVSLMNGD GPISTFNVKE CIFLEDGKRT MSKIFAVTYN TEEKDITCIC 480 GGFQFSGILC RHSLSVLKFQ QVREVPSQYV LDRWKKDFRQ LHVMGRLSSD VVPDNRVDRY 540 DYLSMRCLQL VDSAVLSDKY RLALRLVREV EKFLLNSNTH DDTQPRIKSR IPKVKPNTVT 600 GQNLVNVVTD NGNGGPKGPE ASASAQASQI QKVDWNKHQD FWE

Sequence ? help Back to Top

Protein Sequence Length: 643 aa Download sequence

TTWRSTDSTV GGRPRYEPKF RKRASSTTNC PARIRVKLWG DKLLHVELAN LDHNHPVSPA  60
MARFLNSYKQ LSGPAKRRLR MGGPGAMPVE EPSKMPVDKL GALEELLFGE SKNHSFVERG  120
RLKLQPGDSE ALRLFFTRMQ AKNANFFNVI DLDDEGCVRN VFWADAWSRA MYEYYNDAIT  180
LDTSYVVSKH DMPLVTFLGV NHHGQSVLLG CGLLSDETAE TYTWLFKAWV ACMSGNLPKA  240
IITDQCRGIQ SAVAEVVPGV RHRICLHQIM KKAAEQLSGL SEYKAISKAL QKAAYDSLTV  300
DEFEGEWSTL ITYNGLQGHD WLRSLYECRF SWVPIFLKDA FWAGMSATQR SETITPFFEG  360
YVDLKTSLKQ FLGKYEMILQ SKYEKEAQAD FETFHKQRPP VSKFYMEEQL SKVYTHNMFK  420
KLQDEIEAIM YCHVSLMNGD GPISTFNVKE CIFLEDGKRT MSKIFAVTYN TEEKDITCIC  480
GGFQFSGILC RHSLSVLKFQ QVREVPSQYV LDRWKKDFRQ LHVMGRLSSD VVPDNRVDRY  540
DYLSMRCLQL VDSAVLSDKY RLALRLVREV EKFLLNSNTH DDTQPRIKSR IPKVKPNTVT  600
GQNLVNVVTD NGNGGPKGPE ASASAQASQI QKVDWNKHQD FWE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G52520.1	1e-132	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG033760.10