PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG032930.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 448aa MW: 48341.9 Da PI: 5.3861

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG032930.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.8	2.4e-10	9	87	16	98
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 l +p k a + +++ +++ + led++g+s v+l + +g+ + +GW++Fv+++ +k ++++F+++g s+f v+vf TRIDC6AG032930.5 9 LLIPPKPAGASKMVGLTNQLVCLEDSEGKSSMVRL--SVVDGSLAFYQGWSNFVSDHSIKWAEIILFEYTGCSKF--SVRVFG 87 55666665555444445678*************..8888999999********************986777..888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence
AGEHFEEFLL IPPKPAGASK MVGLTNQLVC LEDSEGKSSM VRLSVVDGSL AFYQGWSNFV 60 SDHSIKWAEI ILFEYTGCSK FSVRVFGADS WERVSFTVET RGEEKKQKES YAPDDLAPCR 120 CSRDINGHHY VSGEYTRSNR PKTKSDGYTD NAEVSPGNLV AKSANAVPGT RRMSANSIED 180 PNGVVGGIVG GSSMAPDNKD GHLANGKHTG NAIFPSYIKA TTRSPETVVI ADEAPLAQEN 240 KDTVALDNKE ANLTIGECKT KCNASITCNN EKATRLDLVP VTIDAAPLSQ ENGDAVELMT 300 FAGHIEDAVM MKESTSAKCA EIHGSDEDLR RKQEGNTVRL ECTAAADKFP SNNKMDTNGN 360 ACSKYEYPGG SQCLGKWKEA TVSGRESLDG TELIRPEKRL KTEEKLVGAM GVNPVERGYD 420 GTHSCVPSQI SESGLTRTKI EHSVNGKG

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence

AGEHFEEFLL IPPKPAGASK MVGLTNQLVC LEDSEGKSSM VRLSVVDGSL AFYQGWSNFV  60
SDHSIKWAEI ILFEYTGCSK FSVRVFGADS WERVSFTVET RGEEKKQKES YAPDDLAPCR  120
CSRDINGHHY VSGEYTRSNR PKTKSDGYTD NAEVSPGNLV AKSANAVPGT RRMSANSIED  180
PNGVVGGIVG GSSMAPDNKD GHLANGKHTG NAIFPSYIKA TTRSPETVVI ADEAPLAQEN  240
KDTVALDNKE ANLTIGECKT KCNASITCNN EKATRLDLVP VTIDAAPLSQ ENGDAVELMT  300
FAGHIEDAVM MKESTSAKCA EIHGSDEDLR RKQEGNTVRL ECTAAADKFP SNNKMDTNGN  360
ACSKYEYPGG SQCLGKWKEA TVSGRESLDG TELIRPEKRL KTEEKLVGAM GVNPVERGYD  420
GTHSCVPSQI SESGLTRTKI EHSVNGKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18960.1	1e-07	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG032930.5