PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC6AG032930.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 853aa MW: 94414.1 Da PI: 8.8733

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC6AG032930.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	31.1	4.1e-10	253	331	16	98
EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 l +p k a + +++ +++ + led++g+s v+l + +g+ + +GW++Fv+++ +k ++++F+++g s+f v+vf TRIDC6AG032930.3 253 LLIPPKPAGASKMVGLTNQLVCLEDSEGKSSMVRL--SVVDGSLAFYQGWSNFVSDHSIKWAEIILFEYTGCSKF--SVRVFG 331 56666665555444455678*************..8888999999********************986777..888875 PP

Sequence ? help Back to Top
Protein Sequence Length: 853 aa Download sequence
RKAFTGSLEK GRRMEEPIEL SDDADDNETI MEMSKKAGKH KEKRRRHNDD GDHKKKKKSV 60 SSHGGDKNTH SADRDKDKRR DMLLSPNKNK DPFHSKEKSR TMPSSHGGDG KMHPGDHHND 120 NKSSTMWRSE YDKYKGIPKK EMKKDKKPWP VHNGGSREEE KKKTVLVLSK EGKMPVLDNS 180 SNKGNKWKKT PMLYDKVKKP RTSDKDDKAG SYDRKKTTPG YNAGHKVQSG HGEKKKVKFA 240 FFKVAGEHFE EFLLIPPKPA GASKMVGLTN QLVCLEDSEG KSSMVRLSVV DGSLAFYQGW 300 SNFVSDHSIK WAEIILFEYT GCSKFSVRVF GADSWERVSF TVETRGEEKK QKESYAPDDL 360 APCRCSRDIN GHHYVSGEYT RSNRPKTKSD GYTDNAEVSP GNLVAKSANA VPGTRRMSAN 420 SIEDPNGVVG GIVGGSSMAP DNKDGHLANG KHTGNAIFPS YIKATTRSPE TVVIADEAPL 480 AQENKDTVAL DNKEANLTIG ECKTKCNASI TCNNEKATRL DLVPVTIDAA PLSQENGDAV 540 ELMTFAGHIE DAVMMKESTS AKCAEIHGSD EDLRRKQEGN TVRLECTAAA DKFPSNNKMD 600 TNGNACSKYE YPGGSQCLGK WKEATVSGRE SLDGTELIRP EKRLKTEEKL VGAMGVNPVE 660 RGYDGTHSCV PSQISESGLT RTKIEHSVNG KGATGKPETK IEQVGPVESI GCRQERNNIS 720 MSANRAVAHQ TEHHFFRQED AKSSNPAPPV PLLPVKVEVS ELDDHRPVLK ASLQFVVPST 780 TQTRLVSCLD TINSLLLQFH HYYCFTTTFM SVCFSILWYK TSIHHTIPSY LSAFEGSYRT 840 YGKIAVSLDV VQS

Sequence ? help Back to Top

Protein Sequence Length: 853 aa Download sequence

RKAFTGSLEK GRRMEEPIEL SDDADDNETI MEMSKKAGKH KEKRRRHNDD GDHKKKKKSV  60
SSHGGDKNTH SADRDKDKRR DMLLSPNKNK DPFHSKEKSR TMPSSHGGDG KMHPGDHHND  120
NKSSTMWRSE YDKYKGIPKK EMKKDKKPWP VHNGGSREEE KKKTVLVLSK EGKMPVLDNS  180
SNKGNKWKKT PMLYDKVKKP RTSDKDDKAG SYDRKKTTPG YNAGHKVQSG HGEKKKVKFA  240
FFKVAGEHFE EFLLIPPKPA GASKMVGLTN QLVCLEDSEG KSSMVRLSVV DGSLAFYQGW  300
SNFVSDHSIK WAEIILFEYT GCSKFSVRVF GADSWERVSF TVETRGEEKK QKESYAPDDL  360
APCRCSRDIN GHHYVSGEYT RSNRPKTKSD GYTDNAEVSP GNLVAKSANA VPGTRRMSAN  420
SIEDPNGVVG GIVGGSSMAP DNKDGHLANG KHTGNAIFPS YIKATTRSPE TVVIADEAPL  480
AQENKDTVAL DNKEANLTIG ECKTKCNASI TCNNEKATRL DLVPVTIDAA PLSQENGDAV  540
ELMTFAGHIE DAVMMKESTS AKCAEIHGSD EDLRRKQEGN TVRLECTAAA DKFPSNNKMD  600
TNGNACSKYE YPGGSQCLGK WKEATVSGRE SLDGTELIRP EKRLKTEEKL VGAMGVNPVE  660
RGYDGTHSCV PSQISESGLT RTKIEHSVNG KGATGKPETK IEQVGPVESI GCRQERNNIS  720
MSANRAVAHQ TEHHFFRQED AKSSNPAPPV PLLPVKVEVS ELDDHRPVLK ASLQFVVPST  780
TQTRLVSCLD TINSLLLQFH HYYCFTTTFM SVCFSILWYK TSIHHTIPSY LSAFEGSYRT  840
YGKIAVSLDV VQS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	43	58	KRRRHNDDGDHKKKKK
2	44	59	KRRRHNDDGDHKKKKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G18960.1	2e-07	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC6AG032930.3