PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC6AG032930.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 870aa    MW: 96304.3 Da    PI: 8.754
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC6AG032930.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B331.14.3e-102553331698
                       EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                       l +p k a + +++  +++ + led++g+s  v+l  +  +g+  + +GW++Fv+++ +k  ++++F+++g s+f   v+vf 
  TRIDC6AG032930.1 255 LLIPPKPAGASKMVGLTNQLVCLEDSEGKSSMVRL--SVVDGSLAFYQGWSNFVSDHSIKWAEIILFEYTGCSKF--SVRVFG 333
                       56666665555444455678***************..8888999999**********************986777..888875 PP
2B336.86.8e-127848621391
                       TT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE. CS
                B3  13 sgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefe 91 
                       + rl lp +  ++              ++l+d+  r W v +    +s  + +t+GWk+Fv an+L++gD +v+ +d + +e  
  TRIDC6AG032930.1 784 QTRLELPDPLSNAVgrkgR---LDRNIVMLKDPMKRLWPVFY--HETSLFVGFTGGWKSFVAANKLEAGDLCVLLMDLDeDELV 862
                       4567777777766654322...233469999***********..******************************9875534444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 870 aa     Download sequence    
QNRKAFTGSL EKGRRMEEPI ELSDDADDNE TIMEMSKKAG KHKEKRRRHN DDGDHKKKKK  60
SVSSHGGDKN THSADRDKDK RRDMLLSPNK NKDPFHSKEK SRTMPSSHGG DGKMHPGDHH  120
NDNKSSTMWR SEYDKYKGIP KKEMKKDKKP WPVHNGGSRE EEKKKTVLVL SKEGKMPVLD  180
NSSNKGNKWK KTPMLYDKVK KPRTSDKDDK AGSYDRKKTT PGYNAGHKVQ SGHGEKKKVK  240
FAFFKVAGEH FEEFLLIPPK PAGASKMVGL TNQLVCLEDS EGKSSMVRLS VVDGSLAFYQ  300
GWSNFVSDHS IKWAEIILFE YTGCSKFSVR VFGADSWERV SFTVETRGEE KKQKESYAPD  360
DLAPCRCSRD INGHHYVSGE YTRSNRPKTK SDGYTDNAEV SPGNLVAKSA NAVPGTRRMS  420
ANSIEDPNGV VGGIVGGSSM APDNKDGHLA NGKHTGNAIF PSYIKATTRS PETVVIADEA  480
PLAQENKDTV ALDNKEANLT IGECKTKCNA SITCNNEKAT RLDLVPVTID AAPLSQENGD  540
AVELMTFAGH IEDAVMMKES TSAKCAEIHG SDEDLRRKQE GNTVRLECTA AADKFPSNNK  600
MDTNGNACSK YEYPGGSQCL GKWKEATVSG RESLDGTELI RPEKRLKTEE KLVGAMGVNP  660
VERGYDGTHS CVPSQISESG LTRTKIEHSV NGKGATGKPE TKIEQVGPVE SIGCRQERNN  720
ISMSANRAVA HQTEHHFFRQ EDAKSSNPAP PVPLLPVKVE VSELDDHRPV LKASLQFVVP  780
STTQTRLELP DPLSNAVGRK GRLDRNIVML KDPMKRLWPV FYHETSLFVG FTGGWKSFVA  840
ANKLEAGDLC VLLMDLDEDE LVYDVEITRK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14560KRRRHNDDGDHKKKKK
24661KRRRHNDDGDHKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.12e-07B3 family protein